mrparse.mr_analyse module

render_template(in_file_path, out_file_path, **kwargs)

Templates the given file with the keyword arguments.

Parameters

• in_file_path (str) – The path to the template

• out_file_path (str) – The path to output the templated file

• **kwargs (dict) – Variables to use in templating

run(seqin, hklin=None, run_serial=False, do_classify=True, pdb_dir=None, phmmer_dblvl=None, search_engine=None, tmhmm_exe=None, deepcoil_exe=None, hhsearch_exe=None, hhsearch_db=None, ccp4cloud=None)

run_analyse_parallel(search_model_finder, classifier, hkl_info, do_classify)

run_analyse_serial(search_model_finder, classifier, hkl_info, do_classify)

write_output_files(search_model_finder, hkl_info=None, classifier=None, ccp4cloud=None)