mrparse.mr_topcons module¶

Created on 16 Nov 2018

@author: jmht

exception OutOfTimeException[source]¶: Bases: Exception

class TMPred(seq_info)[source]¶

Bases: object

cleanup(results_dir)[source]¶

create_annotation(annotation, probabilties)[source]¶

static fix_probabilties(prediction, probabilties)[source]¶

get_prediction()[source]¶

get_results(jobid)[source]¶

job_finished(jobid)[source]¶: Your job with jobid rst_rUF74H is finished! The result file ./rst_rUF74H.zip has been retrieved for jobid rst_rUF74H

parse_topcons_directory(results_dir)[source]¶

static parse_topcons_output(results_file)[source]¶

run_topcons(seqin)[source]¶

submit_job(seqin)[source]¶